/SGE2/bin/lx-amd64/qsub -v JSOC_r10 -e /tmp28/jsocprod/HARPS/definitive/cron_files/2025.04.20.elog -o /tmp28/jsocprod/HARPS/definitive/cron_files/2025.04.20.olog -N DefHarps -q k.q /tmp28/jsocprod/HARPS/definitive/cron_files/DefHarps.2025.04.20.csh
Warning: no access to tty (Bad file descriptor).
Thus no job control in this shell.
TERM=xterm-256color
SGE_CELL=default
PATH=/SGE2/bin:/SGE2/bin/lx-amd64:/home/jsoc/bin/linux_avx:/tmp/8421387.1.k.q:/usr/local/bin:/bin:/usr/bin:/usr/local/perl:/usr/local/bin:/usr/bsd:/bin:/usr/bin:/home/jim/ftp/progs:/usr/local/scripts:/usr/bin/X11:.:/SGE/bin/lx24-amd64
PWD=/home/jsocprod
SGE_EXECD_PORT=6445
SGE_QMASTER_PORT=6444
SGE_ROOT=/SGE2
SHLVL=1
_=/SGE2/bin/lx-amd64/sge_execd
JSOC_r10=1
REQNAME=DefHarps
HOME=/home/jsocprod
SHELL=/bin/csh
USER=jsocprod
LOGNAME=jsocprod
JOB_NAME=DefHarps
JOB_SCRIPT=/SGE2/default/spool/cl2n023/job_scripts/8421387
SGE_BINARY_PATH=/SGE2/bin/lx-amd64
REQUEST=DefHarps
HOSTNAME=cl2n023
QUEUE=k.q
JOB_ID=8421387
ENVIRONMENT=BATCH
ARC=lx-amd64
NQUEUES=1
NSLOTS=1
NHOSTS=1
RESTARTED=0
TMPDIR=/tmp/8421387.1.k.q
TMP=/tmp/8421387.1.k.q
SGE_O_HOME=/home/jsocprod
SGE_O_LOGNAME=jsocprod
SGE_O_PATH=/home/jsoc/cvs/Development/JSOC/bin/linux_avx:/home/jsoc/cvs/Development/JSOC/scripts:/home/jsoc/bin/linux_avx:/usr/lib64/qt-3.3/bin:/usr/bin:/bin:/usr/local/perl:/usr/local/bin:/usr/bsd:/bin:/usr/bin:/home/jim/ftp/progs:/usr/local/scripts:/usr/bin/X11:.
SGE_O_SHELL=/bin/sh
SGE_O_MAIL=/var/spool/mail/jsocprod
SGE_O_HOST=solar3.stanford.edu
SGE_O_WORKDIR=/homeg/jsocprod
SGE_TASK_ID=undefined
SGE_TASK_FIRST=undefined
SGE_TASK_LAST=undefined
SGE_TASK_STEPSIZE=undefined
SGE_ARCH=lx-amd64
SGE_ACCOUNT=sge
SGE_JOB_SPOOL_DIR=/SGE2/default/spool/cl2n023/active_jobs/8421387.1
SGE_STDIN_PATH=/dev/null
SGE_STDOUT_PATH=/tmp28/jsocprod/HARPS/definitive/cron_files/2025.04.20.olog
SGE_STDERR_PATH=/tmp28/jsocprod/HARPS/definitive/cron_files/2025.04.20.elog
SGE_CWD_PATH=/home/jsocprod
HOSTTYPE=x86_64-linux
VENDOR=unknown
OSTYPE=linux
MACHTYPE=x86_64
GROUP=humans
HOST=cl2n023
MAIL=/var/spool/mail/jsocprod
LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lz=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.bz=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.rar=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
CVS_RSH=ssh
GDL_PATH=+/usr/share/gnudatalanguage
G_BROKEN_FILENAMES=1
LANG=en_US.UTF-8
MODULESHOME=/usr/share/Modules
MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles
LOADEDMODULES=
DISPLAY=unix:0.0
JSOCENVSOURCED=1
JSOC_MACHINE=linux_avx
MACHINE=linux_avx
JSOC_DBUSER=production
PAGER=less
JSOC_WARNICC=-Wall -wd1418 -wd1419 -wd310 -wd279 -wd981 -Wno-comment
PGOPTIONS=--client-min-messages=warning
DRMS_INSTALL_DIR=/home/jsoc/releases/jsoc-v10.0.0
DRMS_BINS_INSTALL_DIR=/home/jsoc/releases/jsoc-v10.0.0/bin/linux_avx
DRMS_INCS_INSTALL_DIR=/home/jsoc/releases/jsoc-v10.0.0/include
DRMS_LIBS_INSTALL_DIR=/home/jsoc/releases/jsoc-v10.0.0/lib/linux_avx
DRMS_PARAMS_INSTALL_DIR=/home/jsoc/releases/jsoc-v10.0.0/include/base
DRMS_ROOT_DIR=/homeg/jsoc/git-repo/JSOC-orig
DRMS_SCRS_INSTALL_DIR=/home/jsoc/releases/jsoc-v10.0.0/scripts
DRMS_SRC_INSTALL_DIR=/home/jsoc/releases/jsoc-v10.0.0/src
DRMS_TABLE_DIR=/homeg/jsoc/git-repo/JSOC-orig/TBL_JSOC
WORKFLOW_ROOT=/home/jsoc/releases/jsoc-v10.0.0/src/workflow
WORKFLOW_DATA=/home/jsoc/pipeline/
WORKFLOW_IMG_ROOT=/home/jsoc/hmi
PNAME=cl2n023
SUMPGPORT=5434
JAVA_HOME=/usr/java
EDITOR=vi
MORE=-cs
PRINTER=pacol
LC_ALL=C
SUMSERVER=k1
MANPATH=/SGE2/man:/SGE/man:/usr/share/catman:/usr/share/man:/usr/catman:/usr/man:/usr/local/man:/home/jim/STAGING/man:/usr/pubsw/man
OMP_NUM_THREADS=1
KMP_BLOCKTIME=10
SGE_CLUSTER_NAME=p6444
track_and_ingest_mharp.sh: Invoked as: /home/jsoc/releases/jsoc-v10.0.0/scripts/track_and_ingest_mharp.sh -m /tmp28/jsocprod/HARPS/definitive hmi.Marmask_720s[2025.03.30_00:12:00_TAI-2025.03.31_00:00:37_TAI] hmi.Mharp_720s hmi.Mharp_log_720s
modified job name of job 8421387
modified job name of job 8421387
track_and_ingest_mharp.sh: Staging masks.
track_and_ingest_mharp.sh: Finished staging masks.
track_and_ingest_mharp.sh: Looking up T_REC boundaries in mags.
track_and_ingest_mharp.sh: Processing from 2025.03.30_00:12:00_TAI to 2025.03.31_00:00:00_TAI
track_and_ingest_mharp.sh: Associated T_REC in `hmi.Mharp_log_720s' will be 2025.03.30_00:12:00_TAI
track_and_ingest_mharp.sh: Most recent prior ingest in `hmi.Mharp_log_720s' was 2025.03.29_00:12:00_TAI
track_and_ingest_mharp.sh: Ensuring no gaps in masks.
track_and_ingest_mharp.sh:   Checking for gaps between ingests.
track_and_ingest_mharp.sh:     Prior ingest final frame at 2025.03.30_00:00:00_TAI
track_and_ingest_mharp.sh:     Current start at 2025.03.30_00:12:00_TAI
track_and_ingest_mharp.sh:   Detect no gap between ingests.  Continuing.
track_and_ingest_mharp.sh:   Checking for gaps within the given T_REC range.
track_hmi_check_masks: Beginning.
track_hmi_check_masks: Examining sources and masks at 120 T_RECs.
track_hmi_check_masks: Examined NT = 120 T_RECs.
track_hmi_check_masks:   Of NT, found 120 valid (mag,pgram) pairs.
track_hmi_check_masks:   Of NT, found 120 valid masks.
track_hmi_check_masks: No unexplained absences of masks.
track_hmi_check_masks: Overall mask check passed: 0 missing <= 0 threshold.
track_hmi_check_masks: total time used: 0.947 s wall, 0.360 s cpu
track_hmi_check_masks: Done.
track_and_ingest_mharp.sh: Finished ensuring no gaps in masks.
track_and_ingest_mharp.sh: Beginning tracking.
track_and_ingest_mharp.sh: Executing command: /home/jsoc/releases/jsoc-v10.0.0/scripts/track_hmi_production_driver_stable.sh -r inf hmi.Marmask_720s[2025.03.30_00:12:00_TAI-2025.03.31_00:00:37_TAI] hmi.M_720s /tmp28/jsocprod/HARPS/definitive
track_hmi_production_driver_stable.sh: Invoked as: /home/jsoc/releases/jsoc-v10.0.0/scripts/track_hmi_production_driver_stable.sh -r inf hmi.Marmask_720s[2025.03.30_00:12:00_TAI-2025.03.31_00:00:37_TAI] hmi.M_720s /tmp28/jsocprod/HARPS/definitive
track_hmi_production_driver_stable.sh: Beginning.
track_hmi_production_driver_stable.sh: Exiting with error.
track_and_ingest_mharp.sh: Exiting with error: Filesystem state is OK (but inconsistent).
track_and_ingest_mharp.sh: Can run again, but must use same (or longer) T_REC range.
track_and_ingest_mharp.sh: Do *not* proceed to a new T_REC range.